                Changes in version 1.0.9.5 (2026-09-24)                 

  - No user visual changes.

                Changes in version 1.0.9.4 (2026-07-06)                 

  - No user visual changes.

                Changes in version 1.0.9.3 (2026-07-01)                 

  - No user visual changes.

                Changes in version 1.0.9.2 (2026-05-21)                 

  - No user visual changes.

                Changes in version 1.0.9.1 (2025-07-03)                 

  - No user visual changes.

                 Changes in version 1.0.9 (2025-07-02)                  

  - Tests are modified for compatibility with the upcoming version of
    ggplot2.
  - statgenHTP no longer imports reshape2 and factoextra.

                 Changes in version 1.0.8 (2025-04-29)                  

  - A small bug in a helper function for fitSplineHDM() is fixed. Impact
    on the results is very minimal.
  - Several improvements of the documentation and examples.

                 Changes in version 1.0.7 (2024-10-14)                  

  - For spatial models fitted with SpATS it is now assured that the
    number of segments used for rows and columns is divisible by the
    value of nest.div used. This is done to accommodate a minor fix in
    an upcoming release of SpATS.
  - Functions no longer rely on soft-deprecated ggplot2 functions.

                 Changes in version 1.0.6 (2022-12-13)                  

  - The package has been extended by functions for modelling evolution
    of the genetic signal. This extension consists of functions
    fitSplineHDM() for fitting a hierarchical data model,
    predict.psHDM() for making predictions based on this model, and
    plot.psHDM() for plotting the results. The methods used are
    described in a new vignette.
  - A small bug in detectSingleOutMaize() is fixed. Observations with a
    missing value for one of the involved traits are no longer tagged as
    outliers.

                 Changes in version 1.0.5 (2021-09-15)                  

  - No user visible changes

                 Changes in version 1.0.4 (2021-08-20)                  

  - The removeSerieOut() function now has an extra argument reason
    allowing for restricting removal of outliers to one or more reason
    the outliers where tagged.
  - The plot function for serieOut objects now has an extra argument
    reason allowing for restricting the plotting of outliers to one or
    more reason the outliers where tagged.
  - The detectSerieOut() function is now able to handle plotIds with
    irregular naming, i.e. plotIds starting with a number.
  - The results of estimateSplineParameters() can now be plotted in a
    box plot and histogram.
  - In the estimateSplineParameters() function multiple parameters can
    now be estimated at once.
  - A bug in detectSerieOut() that caused slope outliers to be never
    detected is fixed.
  - A bug causing predictions to be made in fitSpline() for missing
    values at the beginning or end of a time course is fixed.
  - The detectSerieOut() function now checks for number of plotIds per
    plant in the correct location leading to a more user friendly error
    message.

                 Changes in version 1.0.3 (2021-06-18)                  

  - No user visible changes

                 Changes in version 1.0.2 (2021-06-10)                  

  - Plotting second derivatives of fitted splines, plotted first
    derivatives. This is fixed now.
  - The detectSerieOut() function now uses an extra criterion for
    checking if time courses our outlying. See the function
    documentation and vignettes for a full explanation of this new
    criterion.
  - The parameter trait in the removeSerieOut() function is renamed to
    traits and now accepts a vector of traits that for which outlier
    values can be replaced by NA.
  - Plotting the output of detectSerieOut() now has an extra parameter
    geno.decomp to restrict the output to selected levels of the
    geno.decomp variable in the data.
  - Computing the area under the curve in estimateSplineParameters() now
    allows the specification of the time unit used on the x-axis.
  - Fitting models using SpATS is now done using the option centered =
    TRUE by default.

                 Changes in version 1.0.1 (2021-03-09)                  

  - No user visible changes

                 Changes in version 1.0.0 (2021-03-05)                  

  - Initial CRAN Release
