*Evolutionary biology in R (last update: 2023-5-13)
citation:
*Michelle M. Jonika, Maximos Chin, Nathan Anderson, Meghann McConnell, Richard H. Adams, Jeffery P. Demuth, and Heath Blackmon. 2023. EvobiR: Tools for comparative analyses and teaching evolutionary biology.
*
EvobiR is a collection of functions that have proven convenient in our lab for a broad range of analyses:
Comparative analysis of continuous traits influencing discrete states
ABBA/BABA tests of introgression
Tools for evaluating and measuring rate heterogeneity in Mk models
Calculation of probabilities of sex chromosome to autosome fusions
Counting topologies
Working with sequence alignments
Utility functions to ease comparative, phylogenetic, and quantitative genetic analyses
EvobiR can be installed using devtools to install from GitHub.
library(devtools)
install_github('coleoguy/evobir', build_vignettes=T)
library(evobiR)
if you have questions or problems please let me know coleoguy@gmail.com.