                        Changes in version 2.6.0                        

  - Updated download method to use EDIutils package to handle new
    requirement for API keys. Added a function to check for an access
    key and provide instructions if one is not present.
  - Removed parameter for Redownload_data from Zoopdownloader and
    reload_data from Zoopsynther, because the EDIutils functions
    directly read the data but do not save it.
  - Added EMP and FRP data released in May 2026
  - Added EMP data released in June 2025 (sampling from 1972–2023),
    which no longer includes amphipods in the macro dataset; see the
    amphipods_notes (EDI 522) for more information.
  - ~~Fixed issue where EMP macro amphipod counts from before 2014 were
    being converted to unidentified mysids instead of unidentified
    amphipods, since amphipods were not identified to species
    before 2014.~~
  - Fixed issue with biomass conversion for macro and micro zooplankton.
    Previously it was not taking into account the count and instead
    providing the BPUE if 1 individual were present.
  - Added the biomass for the surveys and size classes with the
    appropriate conversation factors and length data. This feature is
    still experimental
  - Fixed issue with crosswalk that may impact Zoopsynther community
    output (values in the species column weren't consistent, some were
    genus species, some just species)
  - Updated FRP data
  - Fixing malfunctions in the taxonomic consistency over time approach.
    Uses of that function prior to this fix may not have appropriately
    resolved for changes in taxonomic consistency over time.
  - Added 20mm 2021 and 2022 data
  - Broke out turbidity into FNU and NTU. Most surveys use NTU, but 20mm
    has switched to FNU recently.
  - Updated the species name for Eurytemora affinis to Eurytemora
    carolleeae based on Jungbluth et al 2021
  - Jungbluth, M. J., J. Burns, L. Grimaldo, A. Slaughter, A. Katla, and
    W. Kimmerer. 2021. Feeding habits and novel prey of larval fishes in
    the northern San Francisco Estuary. Environmental DNA.1-22.
    https://doi.org/10.1002/edn3.226
  - Fixed issue where macrozoop biomass was being incorrectly converted
    to micrograms, resulting in 100X higher biomass values.
  - Added FRP 2022 data and adjusted crosswalk to reflect changes to
    their taxonomic table.
  - Added 2023 FMWT/STN data and adjusted zoopdownloader to reflect new
    date format
  - Added FRP 2023 data and adjusted crosswalk to reflect changes to
    their table.
  - Adjusted crosswalk table to reflect the order "Cladocera" being
    split into several orders.

                        Changes in version 2.5.1                        

  - Added DOP and STN/FMWT 2022 data

                        Changes in version 2.5.0                        

  - Added some missing environmental variables to DOP and removed bottom
    samples for environmental variables except conductivity.
  - Added TowType variable to identify whether each tow was a surface,
    bottom, oblique, or vertical pump sample.
  - Removed crosswalk Inf and -Inf dates and used 2500 and 1800,
    respectively, instead. For some reason, Inf and -Inf dates were no
    longer being treated correctly.
  - Added DOP to Zoopdownloader test
  - Added new co-authors
  - Converted undersampled and crosswalk files to csv so it is easier to
    track changes on git
  - Fixed previously incorrect times in EMP data. Previously, times in
    the EMP data were automatically converted to AM even if they were
    recorded as PM
  - Changed FRP data coordinates to use the sample-specific coordinates
    instead of the general station location coordinates
  - Added DOP data
  - Changed data source for FMWT/STN to EDI
  - Changed default download method of Zoopdownloader to "auto"
  - Updating to newest EMP data.
  - Added newest FMWT/STN data, including new station STN 722
  - Add option to specify download method in Zoopdownloader function.
  - Updated to newest SMSCG data

                        Changes in version 2.4.1                        

  - Updated to newest FMWT macro column names.

                        Changes in version 2.4.0                        

  - Changed all Acanthocyclops vernalis in crosswalk to Acanthocyclops.
  - Added YBFMP data. YBFMP data cannot be used in the Zoopsynther
    function due to issues with taxonomic and life stage resolution.
  - Updated to newest FMWT/SMSCG macro data.

                        Changes in version 2.3.1                        

  - Updated EMP EZ station locations

                        Changes in version 2.3.0                        

  - Used EMP Macro QAQC flags for amphipod data to set amphipod CPUE to
    NA whenever issues were detected (vegetation in net)
  - Added EMP Amphipod data
  - Fixed error where Undersampled taxa were not being flagged,
    identified by Rosemary Hartman
  - Updated EDI download URLs to use pasta links
  - Added 2020 SMSCG data
  - Added updated 2020 EMP data with corrected depth values and
    corrected timezones
  - Added 2020 EMP data (NOTE there is an outstanding issues with the
    EMP bottom depth values, two of which are 0 which should be
    incorrect).

                        Changes in version 2.2.0                        

  - Updated to a corrected version of the 20mm dataset.

                        Changes in version 2.1.0                        

  - Added tests to ensure no volume values are ever NA.
  - Changed the name of the 20mm dataset to "20mm" everywhere for
    consistency. Previously, the output of Zoopdownloader would have the
    name as "twentymm", as would the built-in datasets, and the stations
    dataset.
  - Added 2020 20mm data

                        Changes in version 2.0.0                        

  - Added some simple progress messages to Zoopdownloader.
  - Re-implemented use of the dtplyr package to greatly speed up
    computation, now that support for dplyr::across has been
    implemented. dtplyr >1.1.0 must be used for this to work.
  - Fixed annoying warning message from Zoopdownloader function that 2
    Datetimes failed to parse. Resulting dataset unchanged
  - Redirected data downloads (for those datasets not on EDI) toward the
    new CDFW filelib website (https://filelib.wildlife.ca.gov/Public)
    instead of the old FTP (ftp://ftp.wildlife.ca.gov) by creating a new
    function to pull file lists from HTMLs (and a new dependency on
    rvest), replacing the old function to do the same with FTPs
  - Changed internals to apply 3 tries to each attempt to access a URL
  - Fixed CDFW FTP URL
  - Fixing 20mm bottom depths (formally in feet, now correcting to
    meters like all other studies are converted).
  - Updating with newest 20mm data.
  - Added station location for FMWT 520 (=STN 520)

                        Changes in version 1.1.1                        

  - Corrected timezone error that was shifting the date of some STN,
    FMWT, and 20mm samples by 1 day relative to the datetime.
  - Updated FMWT station location coordinates to the newest version from
    the FMWT database.
  - Corrected inconsistent capitalization of the STN Mont and Honk
    stations, resulting in correct coordinates for all those samples.
  - Removed EMP Meso Sample corresponding to a mostly empty line at the
    end of the csv.

                        Changes in version 1.1.0                        

  - Updated citation info
  - Added 2018 20mm data
  - Added tests to ensure column names have not changed.
  - Added 2019 EMP, FMWT, and STN data

                        Changes in version 1.0.0                        

  - Added SMSCG data
  - Changed EMP source to the Environmental Data Initiative instead of
    the FTP site.
  - Updated to newest versions of FMWT and STN data
  - Added more flexibility to zoop_downloader so the package will not
    break when dates are changed in the source dataset filenames.
  - Changed Summer Townet acronym from TNS to STN.
  - Updated to dplyr 1.0, had to remove dtplyr usage due to
    incompatibility with dplyr 1.0 "_at" functions and new "across"
    function. Everything will be slower until dtplyr is updated.

                        Changes in version 0.3.0                        

  - Moved to github actions for continuous integration testing.
  - Added EMP EZ station latitude and longitude locations
    for 2004-present.
  - Fixed inconsistent Microcystis values in FRP data.
  - Fixed typo in Crosswalk table.

                        Changes in version 0.2.1                        

  - Updated to newest FMWT & STN data. (04/01/2020)

                        Changes in version 0.2.0                        

  - Added an option to the Zoopsynther function to correct for changes
    in taxonomic resolution over time by enforcing taxonomic consistency
    over time.
  - Made all argument names start with a capital letter for consistency.
  - Changed all "Larvae" to "Larva" and "Pupae" to "Pupa" in crosswalk
    and elsewhere for consistency with other singular life stage names.

                        Changes in version 0.1.0                        

  - First stable release.
  - Added testthat tests and continuous integration with Travis CI.
  - Started incorporating zooper version into shiny app.

                     Changes in version 0.0.0.9000                      

  - Added a NEWS.md file to track changes to the package.
