Risk and Gap Analysis for the CGIAR Research Investment
Opportunities Report
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Documentation for package ‘CRIO’ version 1.1.0
Help Pages
| add_scenario_cols | Add scenario descriptor columns |
| aquatic_nutrient_per_kg | Placeholder nutrient values per kg for aquatic foods |
| b4t_levels | Factor levels for the B4T scenario column |
| b4t_regions | CGIAR regions where Breeding For Tomorrow (B4T) is implemented |
| build_b4t_comparison | Compare B4T scenarios with their climate counterfactual |
| build_b4t_comparisons | B4T comparisons for a list of indicator specs |
| build_pathway_analysis | Pathway analysis: which scenarios hit a target |
| cg_lookup | Country to CG region lookup |
| climate_counterpart | Climate run matching a scenario |
| crio_baseline_id | Default baseline scenario |
| crio_plot_all | Make all RIO figures |
| default_pathways | Default pathway names by SSP and RCP |
| exclude_cmdty | Commodities excluded from nutrient availability |
| extract_rules | Extract rules from a classification tree |
| fat_kcal_share | Share of calories from fat by commodity |
| filter_climate | Keep the climate ensemble only |
| food_groups | Food groups used for calorie and water totals |
| get_ader | Total calories against the average dietary energy requirement (ADER) |
| get_calories | Per capita calories by commodity, with totals and shares |
| get_fat_share | Approximate share of calories from fat |
| get_foodavail | Food availability (all commodities and food groups) |
| get_frtveg | Fruit and vegetable availability (g/person/day) |
| get_hunger | Population at risk of hunger |
| get_mder | Total calories against the minimum dietary energy requirement (MDER) |
| get_minkcal | Minimum calorie requirement by country |
| get_nutrient_adequacy | Nutrient availability and adequacy ratios |
| get_sugar_share | Share of calories from sugar |
| get_water | Blue water use, with totals, shares and ratio to 2025 |
| indicator_specs | Indicator specifications |
| list_scenarios | List scenario GDX files |
| load_crio_data | Build all RIO indicator datasets |
| load_region_map | Load the IMPACT region shapefile |
| nutrient_labels | Display names for nutrient codes |
| nutrient_quantity_specs | Nutrient quantity specifications |
| own_cg_region | CG region a region code belongs to |
| plot_b4t_gap_closed | Share of the baseline gap closed by each B4T run |
| plot_b4t_gap_maps | Maps of the target gap: baseline vs one B4T run |
| plot_b4t_heatmap | Heatmap of B4T effects: region x where B4T is implemented |
| plot_gap_overview | Distance-to-target overview across indicators |
| plot_indicator_maps | Four-panel indicator maps |
| plot_pct_hits | Bar chart of the share of scenarios hitting a target |
| plot_region_tree | Plot the classification tree for one region |
| plot_rules_heatmap | Heatmap of tree rules across regions |
| plot_spec_trajectories | Trajectories for one indicator spec |
| plot_target_trajectories | Indicator trajectories against a target |
| read_scenarios | Read one GFSir indicator for many scenarios |
| relabel_scenarios | Relabel scenarios in all datasets |
| rni_lookup | Recommended nutrient intakes (RNI) |
| row_countries | Rest-of-world countries greyed out on maps |
| save_crio_data | Save indicator datasets as RDS and/or CSV |
| scenario_id | Scenario id from a GDX file path |
| select_scenarios | Select scenarios in all datasets |
| summarise_rules | Summarise tree rules by region and outcome |
| world_outline | World country outline for map borders |