# Generated by roxygen2: do not edit by hand

export(AINet)
export(ActivationGate)
export(ClassSwitcher)
export(ConvergentSelector)
export(GerminalCenter)
export(IdiotypicNetwork)
export(ImmuneAlgorithm)
export(ImmuneRepertoire)
export(MemoryPool)
export(Microenvironment)
export(SHMEngine)
export(VDJLibrary)
export(bHIVE)
export(bHIVEParam)
export(bHIVEmodel)
export(honeycombHIVE)
export(honeycombHIVEmodel)
export(refineB)
export(swarmbHIVE)
export(visualizeHIVE)
exportClasses(bHIVEParam)
exportMethods(.defaultScalarArguments)
exportMethods(bHIVE)
exportMethods(clusterRows)
exportMethods(show)
import(ggplot2)
importClassesFrom(SingleCellExperiment,SingleCellExperiment)
importClassesFrom(SummarizedExperiment,SummarizedExperiment)
importClassesFrom(bluster,BlusterParam)
importFrom(BiocParallel,SerialParam)
importFrom(BiocParallel,bplapply)
importFrom(R6,R6Class)
importFrom(Rcpp,sourceCpp)
importFrom(S4Vectors,"metadata<-")
importFrom(S4Vectors,metadata)
importFrom(SingleCellExperiment,reducedDim)
importFrom(SingleCellExperiment,reducedDimNames)
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,colData)
importFrom(bluster,.defaultScalarArguments)
importFrom(bluster,.extractScalarArguments)
importFrom(bluster,.showScalarArguments)
importFrom(bluster,clusterRows)
importFrom(cluster,silhouette)
importFrom(clusterCrit,intCriteria)
importFrom(methods,callNextMethod)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,setClass)
importFrom(methods,setClassUnion)
importFrom(methods,setGeneric)
importFrom(methods,setMethod)
importFrom(methods,setValidity)
importFrom(methods,show)
importFrom(stats,dist)
importFrom(stats,kmeans)
importFrom(stats,median)
importFrom(stats,prcomp)
importFrom(stats,predict)
importFrom(stats,quantile)
importFrom(stats,rnorm)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(stats,setNames)
useDynLib(bHIVE, .registration = TRUE)
