ExperimentHub companion to
cpgdirection: the data layers too
large to ship inside a Bioconductor software package. cpgdirection
retrieves them transparently; direct access:
library(cpgdirectionData)
cpgdData_resources() # what is served
ann <- getEpicv2ProbeGeneAnnotation() # fetched once, cached by the Hub
Air-gapped or pinned setups can serve the same files from a directory:
options(cpgdirectionData.local = "/path/to/rds")
Resources are built by inst/scripts/make-data.R from the full cpgdirection
build; provenance for every layer is documented there and in the
cpgdirection repository.