Package: FCtools
Title: Functional Connectivity Tools
Version: 2.3.1
Date: 2026-09-08
Authors@R: c(
    person("Junhong", "Yu", , "junhong.yu@ntu.edu.sg", role = "aut",
           comment = c(ORCID = "0000-0002-2563-9658")),
    person("Charly", "Billaud", , "charly.billaud@ntu.edu.sg", role = c("aut","cre"),
           comment = c(ORCID = "0009-0001-3466-9963"))
  )
Maintainer: Charly Billaud <charly.billaud@ntu.edu.sg>
Description: Analyzing and visualizing brain connectivity data,
        including network-based statistics (NBS) for linear and linear
        mixed models, both at edge level and functional network level
        (Yeo's 7-networks (Schaefer et al. (2017)
        <doi:10.1093/cercor/bhx179>)). Plots include edge-wise
        connectograms, chord diagrams, network connectograms, heatmaps,
        and 3D glass brain connectivity plots. 'FCtools' works with
        vectors of edges (derived from connectivity/adjacency matrices)
        from the 'Brainnetome' (Fan et al. (2016)
        <doi:10.1093/cercor/bhw157>), 'Schaefer' (100 or 200, each with
        19 'ASeg' subcortices) (Schaefer et al. (2017)
        <doi:10.1093/cercor/bhx179>, Fischl et al. (2002)
        <doi:10.1016/S0896-6273(02)00569-X>), and 'Automated Anatomical
        Labeling' (AAL) atlases (Tzourio-Mazoyer et al. (2002)
        <doi:10.1006/nimg.2001.0978>).
License: GPL-3
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
URL: https://cogbrainhealthlab.github.io/FCtools/
RoxygenNote: 7.3.3
Depends: R (>= 4.1.0)
Imports: Rfast, circlize, cowplot, doParallel, doSNOW, foreach,
        ggplot2, ggplotify, ggraph, grid, gridExtra, igraph, parallel,
        plotly, png, reshape2
Config/pak/sysreqs: cmake libfontconfig1-dev libfreetype6-dev
        libglpk-dev make libicu-dev libpng-dev libuv1-dev libxml2-dev
        libssl-dev
Repository: https://cogbrainhealthlab.r-universe.dev
Date/Publication: 2026-09-16 03:04:18 UTC
RemoteUrl: https://github.com/cogbrainhealthlab/fctools
RemoteRef: HEAD
RemoteSha: 259f554eedd34e771eae7be6b5dbda9f17b57e11
NeedsCompilation: no
Packaged: 2026-10-16 10:45:15 UTC; root
Author: Junhong Yu [aut] (ORCID: <https://orcid.org/0000-0002-2563-9658>),
  Charly Billaud [aut, cre] (ORCID:
    <https://orcid.org/0009-0001-3466-9963>)
