Integrating Multi-modal Single Cell Experiment datasets

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Documentation for package ‘SingleCellMultiModal’ version 1.25.3

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS

Help Pages

SingleCellMultiModal-package	SingleCellMultiModal-package
addCTLabels	addCTLabels
CITEseq	CITEseq
getCellGroups	getCellGroups
GTseq	Parallel sequencing data of single-cell genomes and transcriptomes
ontomap	Obtain a map of cell types for each dataset
removeCache	Manage cache / download directories for study data
scmmCache	Manage cache / download directories for study data
scMultiome	Single-cell Multiome ATAC + Gene Expression
scNMT	Single-cell Nucleosome, Methylation and Transcription sequencing
SCoPE2	Single-cell RNA sequencing and proteomics
seqFISH	Single-cell spatial + Gene Expression
setCache	Manage cache / download directories for study data
SingleCellMultiModal	Combining Modalities into one MultiAssayExperiment