Package: CoreMicrobiomeR
Type: Package
Title: Identification of Core Microbiome
Version: 0.1.0
Authors@R: 
  c(person("Sorna", "A M", role = c("aut"), email = "sornamuthuraman@gmail.com"), person("Mohammad Samir Farooqi",  role = c("aut", "cre"), email = "samirfarooqi8@gmail.com"), person("Dwijesh Chandra Mishra", role = c("aut"), email = "dwij.mishra@gmail.com"), person("Krishna Kumar Chaturvedi", role = c("aut"), email = "kk.chaturvedi@icar.gov.in"), person("Anu Sharma", role = c("aut"), email = "anu.sharma@icar.gov.in"), person("Prawin Arya", role = c("aut"), email = "Prawin.arya@icar.gov.in"), person("Sudhir Srivastava", role = c("aut"), email = "Sudhir.Srivastava@icar.gov.in"), person("Sharanbasappa", role = c("aut"), email = "smadival509@gmail.com"), person("Girish Kumar Jha", role = c("aut"), email = "girish.jha@icar.gov.in"), person("Kabilan", "S", role = c("ctb"), email = "kabilan151414@gmail.com"))
Imports: fastmatch, vegan, SRS, edgeR, ggplot2, ggrepel, stats, plotly,
        reshape2
Maintainer: Mohammad Samir Farooqi <samirfarooqi8@gmail.com>
Description: The Core Microbiome refers to the group of microorganisms
        that are consistently present in a particular environment,
        habitat, or host species. These microorganisms play a crucial
        role in the functioning and stability of that ecosystem.
        Identifying these microorganisms can contribute to the emerging
        field of personalized medicine. The 'CoreMicrobiomeR' is
        designed to facilitate the identification, statistical testing,
        and visualization of this group of microorganisms.This package
        offers three key functions to analyze and visualize microbial
        community data. This package has been developed based on the
        research papers published by Pereira et al.(2018)
        <doi:10.1186/s12864-018-4637-6> and Beule L, Karlovsky P.
        (2020) <doi:10.7717/peerj.9593>.
License: GPL-3
Encoding: UTF-8
LazyData: true
Author: Sorna A M [aut], Mohammad Samir Farooqi [aut, cre], Dwijesh
        Chandra Mishra [aut], Krishna Kumar Chaturvedi [aut], Anu
        Sharma [aut], Prawin Arya [aut], Sudhir Srivastava [aut],
        Sharanbasappa [aut], Girish Kumar Jha [aut], Kabilan S [ctb]
Depends: R (>= 2.10)
RoxygenNote: 7.2.3
NeedsCompilation: no
Packaged: 2026-09-24 08:36:52 UTC; root
Repository: https://cran.r-universe.dev
Date/Publication: 2024-04-04 02:33:41 UTC
RemoteUrl: https://github.com/cran/CoreMicrobiomeR
RemoteRef: HEAD
RemoteSha: 1df1ed8891b0c88fc74d4b3311312ed1bbc14bbb
Built: R 4.6.0; ; 2026-09-24 08:40:51 UTC; unix
