Utilities for the Arctic Data Center
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Documentation for package ‘arcticdatautils’ version 0.7.0
Help Pages
| arcticdatautils-package | arcticdatautils: Utilities for the Arctic Data Center |
| arcticdatautils | arcticdatautils: Utilities for the Arctic Data Center |
| convert_iso_to_eml | Convert an ISO document to EML using an XSLT |
| create_dummy_attributes_dataframe | Create test attributes data.frame |
| create_dummy_enumeratedDomain_dataframe | Create test enumeratedDomain data.frame |
| create_dummy_metadata | Create a test metadata object |
| create_dummy_object | Create a test object |
| create_dummy_package | Create a test package |
| create_dummy_package_full | Create dummy package with fuller metadata |
| create_dummy_parent_package | Create a test parent package |
| create_resource_map | Create a resource map object on a Member Node |
| eml_adcad_annotation | Given a term from the ADC Academic Disciplines (ADCAD) ontology, produce the corresponding annotation |
| eml_add_distribution | Add distribution information to EML |
| eml_add_entity_system | Add system information to entities |
| eml_add_publisher | Add publisher information to EML document |
| eml_arcrc_add_annotation | Add an Arctic Report Card annotation to a dataset |
| eml_arcrc_essay_annotation | Given an essay topic from the Arctic Report Card (ARCRC) ontology, produce the corresponding annotation |
| eml_arcrc_key_variable_annotation | Given a key variable from the Arctic Report Card (ARCRC) ontology, produce the corresponding annotation |
| eml_associated_party | Create an EML associatedParty |
| eml_categorize_dataset | Categorize a dataset with an annotation |
| eml_contact | Create an EML contact. Contact information is passed on to 'eml_party()' |
| eml_creator | Create an EML creator. |
| eml_ecso_annotation | Given a an annotation from the ECSO ontology, produce the corresponding annotation |
| eml_get_raster_metadata | Get raster info from a file on disk |
| eml_get_simple | Get a simple list output from EML::eml_get() |
| eml_nsf_to_project | Create an EML project section from a list of NSF award numbers |
| eml_otherEntity_to_dataTable | Convert otherEntities to dataTables |
| eml_party | Create an EML party |
| eml_set_reference | Set a reference to an EML object |
| eml_set_shared_attributes | Set shared attribute references |
| env_get | Get the current environment name |
| find_newest_object | Find the newest object within the given set of objects |
| format_eml | Generate the EML 2.1.1 format ID |
| format_iso | Generate the ISO 19139 format ID |
| generate_resource_map | Create a resource map RDF/XML file and save is to a temporary path |
| get_all_versions | Get the PIDs of all versions of an object |
| get_coord_list | Get list of Coordinate Reference Systems |
| get_mn_base_url | Get base URL of a Member Node |
| get_ncdf4_attributes | Get a data.frame of attributes from a NetCDF object |
| get_ontology_concepts | Gets all the concepts |
| get_package | Get a structured list of PIDs for the objects in a package |
| get_token | Get the currently set authentication token |
| guess_format_id | Guess format from filename |
| is_authorized | Check if user has authorization to perform an action on an object |
| is_obsolete | Test whether the object is obsoleted by another object |
| is_public_read | Check whether an object has public read access |
| is_token_expired | Determine whether token is expired |
| is_token_set | Test whether a token is set |
| mdq_run | Score a metadata document against a MetaDIG suite |
| mosaic_annotate_attribute | Add a MOSAiC (https://mosaic-expedition.org/) attribute annotation (the returned object does not include the id slot) |
| mosaic_annotate_dataset | Annotating the MOSAiC dataset level annotations |
| mosaic_portal_filter | Creates the choice label pairs to be pasted into a portal document |
| new_uuid | Generate a new UUID PID |
| object_exists | Check if an object exists on a Member Node |
| parse_resource_map | Parse a resource map into a data.frame |
| pid_to_eml_entity | Create EML entity with physical section from any DataONE PID |
| pid_to_eml_physical | Create EML physical objects for the given set of PIDs |
| publish_object | Publish an object on a Member Node |
| publish_update | Publish an updated data package |
| read_ontology | Get an owl file from github |
| read_zip_shapefile | Read a shapefile from a pid |
| recover_failed_submission | Recovers failed submissions |
| reformat_file_name | Helper for publish_object. Reformat the fileName in system metadata. |
| remove_access | Remove a subject from an object's access policy |
| remove_public_read | Remove public read access for an object |
| reorder_pids | Reorder a named list of objects according to the order in the metadata |
| set_access | Set the access policy for an object |
| set_file_name | Set the file name for an object |
| set_public_read | Set public read access for an object |
| set_public_read_all_versions | Set public READ access on all versions of PIDs in data package. |
| set_rights_and_access | Set rights holder with access policy for an object |
| set_rights_holder | Set the rights holder for an object |
| show_indexing_status | Show the indexing status of a set of PIDs |
| sysmeta_to_eml_physical | Create an EML physical object from system metadata |
| title_to_file_name | Formats the eml file name based on the dataset title |
| update_object | Update an object with a new file |
| update_resource_map | Update an existing resource map object on a Member Node |
| which_in_eml | Search through EMLs |